village village village
  • Documentation
  • API
  • Resources
  • FAQ
/
  • DOCUMENTATION
    • SYSTEM OVERVIEW
      • Detailed System Description
      • System Requirements
    • PREPARATION & SETUP
      • Initial Setup
      • Launching the TV Application
      • Remote Access Configuration
      • Telegram Bot Integration
      • Data Persistence & Backups
      • Remote Heartbeat Monitoring
      • Animal Handling
    • SYSTEM OPERATION
      • GUI Overview
      • System Settings
      • Subject Management
      • Manual Task Execution
      • Corridor Calibration
      • Animal Detection & Tracking
      • Toolbar Controls
      • Sound Integration
      • Screen Integration
      • LED Strip
      • Saved Data and Video
      • Timing, Clocks & Latencies
      • System Logic (State Machine)
    • PROTOCOL & TASK DESIGN
      • Protocol Creation
      • Task Development Guide
      • Direct, Audio & Video Functions
      • Custom Camera Interaction
      • Custom Touchscreen Interaction
      • Custom Plotting
      • Custom Scheduled Actions
      • Custom Calibrations
      • Custom AutoNoMouse
    • MAINTENANCE & TROUBLESHOOTING
      • Cleaning & Routine Maintenance
      • Alarm System Overview
      • Troubleshooting Guide
  • API
    • calibration
      • bpod_water_calibration
      • camera_calibration
      • camera_calibration_grid
        • make_circle_grid
      • optogrid_calibration
        • OptoGridCalibration
      • sound_calibration
    • classes
      • calibrations
        • Calibrations
      • collection
        • convert_active
        • Collection
      • enums
        • Actions
        • Active
        • AreaActive
        • Color
        • ControllerEnum
        • Cycle
        • DataTable
        • Info
        • OldVersion
        • PixelType
        • Save
        • ScreenActive
        • State
        • SuperEnum
        • SyncType
      • null_classes
        • NullBpod
        • NullCalibrationBase
        • NullCamera
        • NullChip
        • NullCollection
        • NullLEDStrip
        • NullMotor
        • NullScale
        • NullSoftCodeToBpod
        • NullSoundDevice
        • NullStateMachine
        • NullTelegramBot
        • NullTempSensor
        • NullTouch
      • settings_class
        • Setting
        • Settings
      • subject
        • Subject
    • custom_classes
      • after_session_base
        • AfterSessionBase
      • auto_no_mouse_base
        • AutoNoMouseBase
        • AutonomouseParam
      • calibration_base
      • camera_draw_base
        • CameraDrawBase
      • camera_trigger_base
        • CameraTriggerBase
      • change_cycle_base
        • ChangeCycleBase
      • direct_functions_base
        • DirectFunctionsBase
      • online_plot_base
        • OnlinePlotBase
      • session_plot_base
        • SessionPlotBase
      • subject_plot_base
        • SubjectPlotBase
      • task_base
        • BpodEvent
        • BpodOutput
        • TaskBase
        • village.custom_classes.task_base.TaskError
      • touch_trigger_base
        • TouchTriggerBase
      • training_protocol_base
        • Settings
        • TrainingProtocolBase
        • village.custom_classes.training_protocol_base.TrainingError
    • devices
      • camera
      • chip
        • get_motor
        • get_motor_old
        • LED
        • Motor
      • led_strip
      • motor_old
        • find_pwmchip
        • MotorOld
      • optogrid
        • export_csv
        • og_connect
        • IMUConfig
        • OptoGrid
        • OptoSetting
      • rfid
      • scale
        • get_scale
        • Scale
      • screen
      • sound_device
        • get_sound_device
        • get_sound_devices
        • SoundDevice
      • telegram_bot
      • temp_sensor
        • get_temp_sensor
        • TempSensor
      • touch
        • get_touch
        • Touch
    • gui
      • calibration_layout
      • camera_calibration_layout
        • CameraCalibrationLayout
        • DiagnosticPlotsLayout
      • data_layout
      • gui
      • gui_window
      • layout
      • main_layout
      • monitor_layout
      • settings_layout
      • tasks_layout
    • plots
      • corridor_plot
        • corridor_plot
      • temperatures_plot
        • temperatures_plot
      • weights_plot
        • weights_plot
    • scripts
      • error_queue
      • global_csv_for_subject
        • main
      • import_all
      • log
        • Log
      • parse_bpod_messages
        • parse_input_to_tuple_override
        • parse_output_to_tuple
        • parse_output_to_tuple_override
      • playground
        • measure_softcode_latency
        • BpodWithLatencyTest
      • rsync_to_hard_drive
        • main
        • run_rsync_local
      • rsync_to_server
        • main
        • run_rsync
      • safe_removal_of_data
        • check_files_for_backup_local
        • check_files_for_backup_remote
        • main
        • parse_timestamp_from_filename
        • remove_file
        • remove_old_data
      • time_utils
        • TimeUtils
      • utils
        • active_last_24_hours
        • change_directory_settings
        • change_system_directory_settings
        • create_directories
        • create_directories_from_path
        • create_pixmap
        • delete_all_elements_from_layout
        • download_github_repositories
        • get_x_value_interp
        • has_low_disk_space
        • interpolate
        • is_active
        • is_active_regular
        • reformat_trial_data
        • setup_logging
        • transform_raw_to_clean
        • validate_subject_name
    • manager
    • main
  • RESOURCES
    • HARDWARE RESOURCES
      • List of Parts & Design Files
      • Assembly Guide
      • Assembly Guide (with Eco-HAB)
      • Assembly Guide (Rat Version)
    • SOFTWARE RESOURCES
      • Manual Software Installation
      • Disk Image
  • FAQ
    • FAQ
      • Frequently Asked Questions
  1. village /
  2. DOCUMENTATION /
  3. SYSTEM OVERVIEW
View Source Open in ChatGPT Open in Claude

SYSTEM OVERVIEW

  • Detailed System Description
  • System Requirements
Previous
DOCUMENTATION
Next
Detailed System Description

© Brain Circuits and Behavior Lab

Made with Sphinx and Shibuya theme.

GitHub Contact: braincircuitsbehavior@gmail.com